Miyakogusa Predicted Gene

Lj2g3v2195520.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JH75_SOYBN 1237 77.2 86.0 (tr|I1JH75) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT5G54090.1 799 54.1 71.2 | Symbols: | DNA mismatch repair protein MutS, type 2 | chr5:21948283-21952550 REVERSE LENGTH=796
Medicago Medtr5g068600.6 1223 76.3 85.3 | DNA mismatch repair MUTS family protein | HC | chr5:29054350-29066879 | 20130731
Soybean Glyma02g38590.1 1113 71.6 79.9  
LJGI gnl|LJGI|GO011139 91.7 98.0 98.0 homologue to UniRef100_A7QET1 Cluster: Chromosome chr16 scaffold_86 whole genome shotgun sequence; n=1; Vitis vinifera|Rep:, partial (2%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2195520.2 length: 788 aa.
IPR000432 DNA mismatch repair protein MutS, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006298 mismatch repair    
Molecular Function GO:0030983 mismatched DNA binding    
HMMPfam PF00488 MutS_V 4.6e-37 404-602
HMMSmart SM00534 ATPase 3.5e-68 418-604
PatternScan PS00486 DNA_MISMATCH_REPAIR_2 NA 500-516
IPR005747 DNA mismatch repair protein MutS, type 2
Molecular Function GO:0003684 damaged DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0045005 maintenance of fidelity involved in DNA-dependent DNA replication    
HMMPIR PIRSF005814 Predicted 6.7e-224 1-788
IPR007696 DNA mismatch repair protein MutS, core
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006298 mismatch repair    
Molecular Function GO:0030983 mismatched DNA binding    
HMMSmart SM00533 DNA-binding 8.1e-05 40-379
superfamily SSF48334 DNA 7.4e-09 159-327
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.3e-39 397-610
no_ID  
Coil coil coiled-coil NA 194-222
603-631
Gene3D G3DSA:3.40.50.300 no description 3e-61 402-605
HMMPanther PTHR11361 DNA 4.4e-239 138-685
HMMPanther PTHR11361:SF6 MUTS 4.4e-239 138-685
Seg seg seg NA 249-260
514-526
Wolf-PSORT
Lj2g3v2195520.2	chlo 8, cyto 4, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2195520.2