Miyakogusa Predicted Gene
- Lj2g3v2185510.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MB64_SOYBN |
407 |
87.8 |
95.0 |
(tr|I1MB64) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G24600.1 |
311 |
67.8 |
82.6 |
| Symbols: | Protein of unknown function, DUF599 | chr5:8421790-8423342 REVERSE LENGTH=248 |
| Medicago |
Medtr5g068640.1 |
384 |
83.4 |
91.9 |
| transmembrane protein, putative | HC | chr5:29072389-29070970 | 20130731 |
| Soybean |
Glyma14g36770.1 |
407 |
87.8 |
95.0 |
|
| LJGI |
gnl|LJGI|BP039329 |
678 |
100.0 |
100.0 |
similar to UniRef100_A7QNP7 Cluster: Chromosome undetermined scaffold_133, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_133, whole genome shotgun sequence - Vitis vinifera (Grape), partial (39%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2185510.1 |
length: 249 aa. |
| IPR006747 |
Protein of unknown function DUF599 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04654 |
DUF599 |
3.1e-67 |
9-219 |
| no_ID |
|
| HMMPanther |
PTHR31168 |
FAMILY |
7.5e-99 |
1-220 |
| Seg |
seg |
seg |
NA |
224-242 |
- Wolf-PSORT
Lj2g3v2185510.1 chlo 3, cyto 3, vacu 3, mito 2, cyto_nucl 2, E.R._vacu 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2185510.1 |
|