Miyakogusa Predicted Gene
- Lj2g3v2184480.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6T5D2_SOYBN |
270 |
81.8 |
90.3 |
(tr|C6T5D2) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT1G04635.1 |
204 |
59.4 |
81.3 |
| Symbols: EMB1687 | ribonuclease P family protein / Rpp14 family protein | chr1:1291350-1291805 FORWARD LENGTH=151 |
| Medicago |
Medtr5g068650.1 |
259 |
77.1 |
89.5 |
| ribonuclease P/MRP protein subunit POP5, putative | HC | chr5:29077104-29074343 | 20130731 |
| Soybean |
Glyma14g36760.1 |
270 |
81.8 |
90.3 |
|
| LJGI |
gnl|LJGI|FS344174 |
922 |
100.0 |
100.0 |
similar to UniRef100_A7QES9 Cluster: Chromosome chr16 scaffold_86, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_86, whole genome shotgun sequence - Vitis vinifera (Grape), partial (89%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2184480.1 |
length: 154 aa. |
| IPR002759 |
Ribonuclease P/MRP protein subunit |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004540 |
ribonuclease activity |
|
|
| Biological Process |
GO:0008033 |
tRNA processing |
|
|
| HMMPfam |
PF01900 |
RNase_P_Rpp14 |
3.6e-27 |
7-117 |
| no_ID |
|
| HMMPanther |
PTHR10993 |
OCTANOYLTRANSFERASE |
5.4e-46 |
8-125 |
| HMMPanther |
PTHR10993:SF1 |
RIBONUCLEASES |
5.4e-46 |
8-125 |
- Wolf-PSORT
Lj2g3v2184480.1 nucl 6, chlo 4, cyto 1, plas 1, extr 1, cysk 1, cysk_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2184480.1 |
|