Miyakogusa Predicted Gene
- Lj2g3v2171910.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3STD8_LOTJA |
585 |
98.9 |
99.3 |
(tr|I3STD8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G10870.1 |
353 |
65.0 |
82.7 |
| Symbols: MES17, ATMES17 | methyl esterase 17 | chr3:3401228-3402612 REVERSE LENGTH=276 |
| Medicago |
Medtr3g093730.1 |
473 |
80.1 |
89.2 |
| methylesterase | HC | chr3:42825561-42821409 | 20130731 |
| Soybean |
Glyma02g38410.1 |
473 |
85.7 |
90.7 |
|
| LJGI |
gnl|LJGI|TC72568 |
1104 |
99.6 |
99.6 |
similar to UniRef100_A7Q3Z3 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2171910.1 |
length: 285 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.40.50.1820 |
no description |
9.2e-51 |
27-274 |
| HMMPanther |
PTHR10992 |
ALPHA/BETA |
1.7e-85 |
26-283 |
| HMMPanther |
PTHR10992:SF56 |
HYDROLASE, |
1.7e-85 |
26-283 |
| HMMPfam |
PF12697 |
Abhydrolase_6 |
3.7e-22 |
30-264 |
| superfamily |
SSF53474 |
alpha/beta-Hydrolases |
4.1e-27 |
26-273 |
- Wolf-PSORT
Lj2g3v2171910.1 golg 4, cyto 3, vacu 2, E.R. 2, cyto_nucl 2, E.R._vacu 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2171910.1 |
Not targeted |
-67.320 |
-17.027 |
-9.574 |
94.56% |
-40.719
|