| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1JH54_SOYBN | 2302 | 85.8 | 91.7 | (tr|I1JH54) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep | AT2G40770.1 | 1547 | 60.9 | 73.8 | | Symbols: | zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding | chr2:17013535-17021315 REVERSE LENGTH=1664 |
| Medicago | Medtr5g067980.1 | 2172 | 82.7 | 89.5 | | SNF2 domain protein/helicase domain protein | HC | chr5:28736334-28720226 | 20130731 |
| Soybean | Glyma02g38370.1 | 2260 | 83.0 | 88.7 | |
| LJGI | gnl|LJGI|TC76133 | 430 | 99.1 | 99.1 | similar to UniRef100_A7Q3Y7 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%) |
| Lj2g3v2171850.2 | length: 1307 aa. | |||
| IPR000330 | SNF2-related | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003677 | DNA binding | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| HMMPfam | PF00176 | SNF2_N | 5.6e-63 | 1-419 |
| IPR001650 | Helicase, C-terminal | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0004386 | helicase activity | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| HMMSmart | SM00490 | helicase | 0.00018 | 1119-1211 |
| ProfileScan | PS51194 | HELICASE_CTER | 9.065 | 1091-1262 |
| IPR001841 | Zinc finger, RING-type | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMSmart | SM00184 | Ring | 0.00016 | 994-1041 |
| ProfileScan | PS50089 | ZF_RING_2 | 10.940 | 994-1042 |
| IPR001965 | Zinc finger, PHD-type | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMSmart | SM00249 | PHD | 3.6e-08 | 50-118 |
| IPR011011 | Zinc finger, FYVE/PHD-type | |||
| superfamily | SSF57903 | FYVE/PHD | 2.8e-08 | 42-118 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 3e-08 | 45-119 988-1059 |
| IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | |||
| HMMSmart | SM00487 | DEAD-like | 0.0093 | 1-294 |
| ProfileScan | PS51192 | HELICASE_ATP_BIND_1 | 9.836 | 123-286 |
| IPR019786 | Zinc finger, PHD-type, conserved site | |||
| PatternScan | PS01359 | ZF_PHD_1 | NA | 51-117 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | |||
| superfamily | SSF52540 | P-loop | 1.1e-38 | 1-323 325-1288 |
| no_ID | ||||
| Gene3D | G3DSA:3.40.50.300 | no description | 6.7e-06 | 127-288 1086-1224 |
| HMMPanther | PTHR10799 | SWI/SNF-RELATED | 4.9e-301 | 1-1265 |
| HMMPanther | PTHR10799:SF320SUBFAMILY | NOT | 4.9e-301 | 1-1265 |
| HMMPfam | PF13923 | zf-C3HC4_2 | 8.9e-07 | 991-1043 |
| superfamily | SSF57850 | RING/U-box | 8.3e-11 | 989-1057 |
Lj2g3v2171850.2 cyto 9, chlo 2, nucl 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v2171850.2 |