| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1JH54_SOYBN | 2848 | 83.6 | 90.0 | (tr|I1JH54) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep | AT2G40770.1 | 1858 | 58.9 | 72.3 | | Symbols: | zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding | chr2:17013535-17021315 REVERSE LENGTH=1664 |
| Medicago | Medtr5g067980.1 | 2683 | 80.3 | 87.7 | | SNF2 domain protein/helicase domain protein | HC | chr5:28736334-28720226 | 20130731 |
| Soybean | Glyma02g38370.1 | 2739 | 79.8 | 86.2 | |
| LJGI | gnl|LJGI|DC593101 | 515 | 96.1 | 96.1 | similar to UniRef100_Q7XJP0 Cluster: SNF2/SWI2 family global transcription factor; n=1; Arabidopsis thaliana|Rep: SNF2/SWI2 family global transcription factor - Arabidopsis thaliana (Mouse-ear cress), partial (7%) |
| Lj2g3v2171850.1 | length: 1667 aa. | |||
| IPR000330 | SNF2-related | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003677 | DNA binding | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| HMMPfam | PF00176 | SNF2_N | 1.3e-72 | 288-779 |
| IPR001650 | Helicase, C-terminal | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0004386 | helicase activity | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| HMMSmart | SM00490 | helicase | 0.00018 | 1479-1571 |
| ProfileScan | PS51194 | HELICASE_CTER | 9.065 | 1451-1622 |
| IPR001841 | Zinc finger, RING-type | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMSmart | SM00184 | Ring | 0.00016 | 1354-1401 |
| ProfileScan | PS50089 | ZF_RING_2 | 10.940 | 1354-1402 |
| IPR001965 | Zinc finger, PHD-type | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMSmart | SM00249 | PHD | 3.6e-08 | 410-478 |
| IPR011011 | Zinc finger, FYVE/PHD-type | |||
| superfamily | SSF57903 | FYVE/PHD | 2.8e-08 | 402-478 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 4e-08 | 405-479 1348-1419 |
| IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | |||
| HMMSmart | SM00487 | DEAD-like | 2.5e-18 | 281-654 |
| ProfileScan | PS51192 | HELICASE_ATP_BIND_1 | 9.836 | 483-646 |
| IPR019786 | Zinc finger, PHD-type, conserved site | |||
| PatternScan | PS01359 | ZF_PHD_1 | NA | 411-477 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | |||
| superfamily | SSF52540 | P-loop | 1.1e-38 | 229-683 685-1648 |
| no_ID | ||||
| Gene3D | G3DSA:3.40.50.300 | no description | 9.3e-06 | 487-648 1446-1584 |
| HMMPanther | PTHR10799 | SWI/SNF-RELATED | 0 | 175-1625 |
| HMMPanther | PTHR10799:SF320SUBFAMILY | NOT | 0 | 175-1625 |
| HMMPfam | PF13923 | zf-C3HC4_2 | 1.2e-06 | 1351-1403 |
| Seg | seg | seg | NA | 2-13 271-287 |
| superfamily | SSF57850 | RING/U-box | 8.3e-11 | 1349-1417 |
Lj2g3v2171850.1 nucl 5, mito 3.5, chlo 3, cyto_nucl 3, cysk_nucl 3
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v2171850.1 |