Miyakogusa Predicted Gene

Lj2g3v2125720.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T7X8_LOTJA 176 100.0 100.0 (tr|I3T7X8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G27330.1 87.0 46.3 76.8 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:11695350-11696563 REVERSE LENGTH=116
Medicago Medtr3g029580.2 126 71.1 82.2 | RNA recognition motif, a.k.a. RRM, RBD protein | HC | chr3:9308768-9310458 | 20130731
Soybean Glyma01g44260.1 136 82.3 92.4  
LJGI gnl|LJGI|GO036259 511 100.0 100.0 weakly similar to UniRef100_A7PP93 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2125720.1 length: 86 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 1.1e-19 24-85
HMMSmart SM00360 RNA 1.1e-13 23-86
ProfileScan PS50102 RRM 15.818 22-86
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1.5e-21 21-86
no_ID  
HMMPanther PTHR24012 FAMILY 1.9e-18 23-84
superfamily SSF54928 RNA-binding 1.9e-19 5-86
Wolf-PSORT
Lj2g3v2125720.1	chlo 9, nucl 2, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2125720.1