Miyakogusa Predicted Gene
- Lj2g3v2124900.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LG13_SOYBN |
1003 |
89.5 |
93.4 |
(tr|I1LG13) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G17020.2 |
942 |
84.3 |
90.1 |
| Symbols: XPO1A | exportin 1A | chr5:5594904-5602467 FORWARD LENGTH=1060 |
| Medicago |
Medtr5g007790.1 |
988 |
89.9 |
93.6 |
| chromosome region maintenance protein 1/exportin | HC | chr5:1516370-1530958 | 20130731 |
| Soybean |
Glyma11g01370.1 |
1002 |
89.5 |
93.4 |
|
| LJGI |
gnl|LJGI|TC74322 |
864 |
99.8 |
99.8 |
similar to UniRef100_Q0WV73 Cluster: Exportin1 (XPO1) like protein; n=2; Arabidopsis thaliana|Rep: Exportin1 (XPO1) like protein - Arabidopsis thaliana (Mouse-ear cress), partial (36%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2124900.1 |
length: 543 aa. |
| IPR011989 |
Armadillo-like helical |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.25.10.10 |
no description |
3.5e-130 |
179-501 |
| IPR014877 |
CRM1 C-terminal domain |
| HMMPfam |
PF08767 |
CRM1_C |
9.2e-129 |
180-501 |
| HMMSmart |
SM01102 |
CRM1 |
2.4e-187 |
180-502 |
| IPR016024 |
Armadillo-type fold |
| Molecular Function |
GO:0005488 |
binding |
|
|
| superfamily |
SSF48371 |
ARM |
6.2e-113 |
178-502 |
| no_ID |
|
| HMMPanther |
PTHR11223 |
EXPORTIN |
0 |
17-541 |
| HMMPanther |
PTHR11223:SF2 |
EXPORTIN |
0 |
17-541 |
| Seg |
seg |
seg |
NA |
510-523 |
- Wolf-PSORT
Lj2g3v2124900.1 chlo 4, nucl 4, vacu 2, cyto_nucl 2, cysk_nucl 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2124900.1 |
|