Miyakogusa Predicted Gene

Lj2g3v2124280.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LG37_SOYBN 2402 80.7 89.1 (tr|I1LG37) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G18110.1 1873 65.8 78.9 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) superfamily protein | chr3:6204940-6209691 REVERSE LENGTH=1440
Medicago Medtr5g008300.1 2305 77.6 86.9 | PPR containing plant-like protein | HC | chr5:1729882-1736023 | 20130731
Soybean Glyma11g01570.1 2351 81.6 89.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2124280.1 length: 1488 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 7.8e-05 395-425
743-764
813-841
887-911
919-947
1096-1118
1129-1154
HMMPfam PF13041 PPR_2 3.4e-10 252-296
322-369
428-474
501-544
985-1032
HMMPfam PF13812 PPR_3 0.0031 1058-1089
HMMTigr TIGR00756 PPR: 6.9e-06 254-286
325-358
361-394
395-428
431-464
465-498
500-533
536-569
708-740
813-845
918-950
988-1019
1023-1055
1129-1160
ProfileScan PS51375 PPR 5.623 251-285
286-322
323-357
358-392
393-427
428-462
463-497
498-532
533-567
568-598
634-664
704-738
739-773
810-844
775-809
845-879
880-914
915-949
950-984
985-1019
1020-1054
1055-1089
1090-1124
1125-1159
1160-1194
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 6.1e-07 325-522
577-839
986-1161
no_ID  
HMMPanther PTHR24015 FAMILY 3.1e-151 12-1192
HMMPanther PTHR24015:SF0 SUBFAMILY 3.1e-151 12-1192
Seg seg seg NA 2-14
22-52
643-652
1434-1443
1448-1460
superfamily SSF48452 TPR-like 8.3e-05 531-850
superfamily SSF81901 HCP-like 0.00048 192-511
985-1154
Wolf-PSORT
Lj2g3v2124280.1	chlo 6, cyto 6, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2124280.1