Miyakogusa Predicted Gene

Lj2g3v2103090.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M4S0_SOYBN 1162 84.8 91.3 (tr|I1M4S0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G37170.1 874 64.2 78.8 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:17498580-17500655 REVERSE LENGTH=691
Medicago Medtr5g008600.1 1111 81.4 88.1 | pentatricopeptide (PPR) repeat protein | HC | chr5:1841187-1847304 | 20130731
Soybean Glyma13g40750.1 1161 84.8 91.3  
LJGI gnl|LJGI|FS318362 1495 100.0 100.0 weakly similar to UniRef100_A7R3R7 Cluster: Chromosome undetermined scaffold_560, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_560, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2103090.1 length: 674 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 1.2e-07 136-164
166-194
HMMPfam PF13041 PPR_2 1.3e-08 265-313
366-413
HMMPfam PF13812 PPR_3 0.0047 107-130
440-465
HMMTigr TIGR00756 PPR: 1.5e-06 136-165
166-194
237-268
268-302
369-402
ProfileScan PS51375 PPR 8.714 67-101
36-66
133-167
102-132
168-198
235-269
270-300
301-335
367-401
336-366
402-432
438-468
504-538
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.9e-10 435-523
no_ID  
HMMPanther PTHR24015 FAMILY 0 38-674
HMMPanther PTHR24015:SF97 SUBFAMILY 0 38-674
HMMPfam PF14432 DYW_deaminase 2.9e-18 547-664
Seg seg seg NA 23-33
superfamily SSF48452 TPR-like 0.0017 343-520
107-261
Wolf-PSORT
Lj2g3v2103090.1	mito 9, chlo 3, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2103090.1