Miyakogusa Predicted Gene

Lj2g3v2099820.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL C6TEP8_SOYBN 594 83.8 88.2 (tr|C6TEP8) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT5G08280.1 537 80.1 89.1 | Symbols: HEMC | hydroxymethylbilane synthase | chr5:2663763-2665596 REVERSE LENGTH=382
Medicago Medtr4g076600.1 579 81.4 90.5 | porphobilinogen deaminase | HC | chr4:29299820-29303409 | 20130731
Soybean Glyma01g43720.1 594 83.8 88.2  
LJGI gnl|LJGI|TC64001 2050 99.9 99.9 homologue to UniRef100_Q43082 Cluster: Porphobilinogen deaminase, chloroplast precursor; n=1; Pisum sativum|Rep: Porphobilinogen deaminase, chloroplast precursor - Pisum sativum (Garden pea), partial (85%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2099820.1 length: 344 aa.
IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase
method AccNumber shortName E-value location
Molecular Function GO:0004418 hydroxymethylbilane synthase activity    
Biological Process GO:0033014 tetrapyrrole biosynthetic process    
FPrintScan PR00151 PORPHBDMNASE 5.8e-43 80-100
111-130
159-176
179-196
266-283
HAMAP MF_00260 Porphobil_deam 33.843 36-336
HMMPIR PIRSF001438 Porphobilinogen 2.4e-155 35-344
HMMPanther PTHR11557 PORPHOBILINOGEN 2.1e-134 20-336
HMMTigr TIGR00212 hemC: 2.8e-99 37-335
IPR022417 Porphobilinogen deaminase, N-terminal
Biological Process GO:0033014 tetrapyrrole biosynthetic process    
HMMPfam PF01379 Porphobil_deam 1.1e-81 37-252
IPR022418 Porphobilinogen deaminase, C-terminal
Biological Process GO:0033014 tetrapyrrole biosynthetic process    
Gene3D G3DSA:3.30.160.40 no description 1.3e-17 257-340
HMMPfam PF03900 Porphobil_deamC 6.4e-19 262-334
superfamily SSF54782 Porphobilinogen 1.1e-20 256-344
IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site
Biological Process GO:0018160 peptidyl-pyrromethane cofactor linkage    
Biological Process GO:0033014 tetrapyrrole biosynthetic process    
PatternScan PS00533 PORPHOBILINOGEN_DEAM NA 267-283
no_ID  
Gene3D G3DSA:3.40.190.10 no description 4.7e-31 37-145
146-235
HMMPanther PTHR11557:SF0 SUBFAMILY 2.1e-134 20-336
Seg seg seg NA 145-154
superfamily SSF53850 Periplasmic 1.7e-76 34-255
Wolf-PSORT
Lj2g3v2099820.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2099820.1