Miyakogusa Predicted Gene

Lj2g3v2088480.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1M1I2_SOYBN 143 56.6 72.7 (tr|I1M1I2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G03630.1 105 46.2 60.1 | Symbols: | RNI-like superfamily protein | chr4:1608750-1610037 FORWARD LENGTH=220
Medicago Medtr2g018910.1 145 54.5 72.0 | F-box/LRR protein | HC | chr2:6040628-6044118 | 20130731
Soybean Glyma13g29200.1 143 56.6 72.7  
LJGI gnl|LJGI|TC63939 75.8 79.8 79.8 similar to UniRef100_Q2HSK3 Cluster: Cyclin-like F-box; n=1; Medicago truncatula|Rep: Cyclin-like F-box - Medicago truncatula (Barrel medic), partial (37%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2088480.1 length: 267 aa.
IPR006553 Leucine-rich repeat, cysteine-containing subtype
method AccNumber shortName E-value location
HMMSmart SM00367 Leucine-rich 1.3e+02 61-86
101-126
127-152
185-209
210-233
no_ID  
Gene3D G3DSA:3.80.10.10 no description 4.9e-16 37-224
HMMPanther PTHR23125 F-BOX/LEUCINE 1.6e-34 106-259
HMMPanther PTHR23125:SF23 N7-RELATED 1.6e-34 106-259
Seg seg seg NA 246-259
superfamily SSF52047 RNI-like 1.7e-13 1-225
Wolf-PSORT
Lj2g3v2088480.1	cyto 7, chlo 2, cysk 2, nucl 1, plas 1, golg 1, chlo_mito 1, nucl_plas 1, golg_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2088480.1