Miyakogusa Predicted Gene
- Lj2g3v2088450.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JAE5_SOYBN |
498 |
90.7 |
97.7 |
(tr|I1JAE5) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT5G42080.1 |
460 |
81.9 |
95.0 |
| Symbols: ADL1, ADL1A, AG68, DRP1A, RSW9, DL1 | dynamin-like protein | chr5:16820661-16824536 REVERSE LENGTH=610 |
| Medicago |
Medtr8g099550.1 |
500 |
91.5 |
97.7 |
| dynamin-like protein 1E | HC | chr8:42036981-42044826 | 20130731 |
| Soybean |
Glyma01g43550.1 |
498 |
90.7 |
97.7 |
|
| LJGI |
gnl|LJGI|TC62968 |
1516 |
99.9 |
99.9 |
homologue to UniRef100_Q39828 Cluster: SDL5A; n=1; Glycine max|Rep: SDL5A - Glycine max (Soybean), partial (77%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2088450.1 |
length: 259 aa. |
| IPR000375 |
Dynamin central domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005525 |
GTP binding |
|
|
| HMMPfam |
PF01031 |
Dynamin_M |
1.6e-70 |
7-259 |
| IPR022812 |
Dynamin |
| HMMPanther |
PTHR11566 |
DYNAMIN |
9.5e-92 |
1-259 |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| superfamily |
SSF52540 |
P-loop |
1.6e-12 |
1-96 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
2.3e-28 |
1-94 |
| HMMPanther |
PTHR11566:SF12 |
DYNAMIN |
9.5e-92 |
1-259 |
- Wolf-PSORT
Lj2g3v2088450.1 cyto 8, chlo 1, nucl 1, mito 1, extr 1, E.R. 1, pero 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2088450.1 |
|