database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | G7J2L9_MEDTR | 995 | 63.9 | 74.3 | (tr|G7J2L9) SDA1-like protein OS=Medicago truncatula GN=MTR_3g086350 PE=4 SV=1 |
TAIR_pep | AT1G13160.1 | 546 | 54.4 | 70.1 | | Symbols: | ARM repeat superfamily protein | chr1:4484634-4488388 FORWARD LENGTH=804 |
Medicago | Medtr3g086350.1 | 995 | 63.9 | 74.3 | | SDA1-like protein | HC | chr3:39117666-39110826 | 20130731 |
Soybean | Glyma11g37660.1 | 754 | 72.7 | 81.2 | |
LJGI | gnl|LJGI|CN825757 | 1332 | 97.7 | 97.7 | similar to UniRef100_Q0J9V2 Cluster: Os04g0630000 protein; n=1; Oryza sativa Japonica Group|Rep: Os04g0630000 protein - Oryza sativa subsp. japonica (Rice), partial (37%) |
Lj2g3v2087760.1 | length: 775 aa. | |||
IPR007949 | SDA1 domain | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
HMMPfam | PF05285 | SDA1 | 2.2e-58 | 443-774 |
IPR012977 | Uncharacterised domain NUC130/133, N-terminal | |||
HMMPfam | PF08158 | NUC130_3NT | 3.8e-17 | 73-124 |
IPR016024 | Armadillo-type fold | |||
Molecular Function | GO:0005488 | binding | ||
superfamily | SSF48371 | ARM | 9.1e-07 | 71-582 |
IPR027312 | Sda1 | |||
Biological Process | GO:0000055 | ribosomal large subunit export from nucleus | ||
Biological Process | GO:0030036 | actin cytoskeleton organization | ||
Biological Process | GO:0042273 | ribosomal large subunit biogenesis | ||
HMMPanther | PTHR12730:SF0 | SUBFAMILY | 5.9e-252 | 1-773 |
no_ID | ||||
Coil | coil | coiled-coil | NA | 285-306 |
HMMPanther | PTHR12730 | HSDA/SDA1-RELATED | 5.9e-252 | 1-773 |
Seg | seg | seg | NA | 250-262 285-294 517-537 548-597 |
Lj2g3v2087760.1 nucl 8, cyto 5
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj2g3v2087760.1 | Twilight zone | -9.007 | -0.302 | -0.087 | 3.21% | -8.617 |