Miyakogusa Predicted Gene
- Lj2g3v2087750.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KLR5_SOYBN |
221 |
67.9 |
75.0 |
(tr|K7KLR5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G24620.1 |
167 |
68.3 |
79.2 |
| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr5:8430918-8432289 FORWARD LENGTH=420 |
| Medicago |
Medtr8g056820.1 |
139 |
57.6 |
68.6 |
| pathogenesis-related thaumatin family protein | HC | chr8:18954964-18954191 | 20130731 |
| Soybean |
Glyma06g14390.1 |
256 |
75.0 |
80.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2087750.1 |
length: 170 aa. |
| IPR001938 |
Thaumatin |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:2.60.110.10 |
no description |
2.9e-35 |
1-115 |
| HMMPfam |
PF00314 |
Thaumatin |
4.9e-38 |
1-114 |
| HMMSmart |
SM00205 |
Thaumatin |
9.4e-15 |
1-114 |
| ProfileScan |
PS51367 |
THAUMATIN_2 |
20.487 |
1-114 |
| superfamily |
SSF49870 |
Osmotin, |
4.3e-56 |
1-114 |
| no_ID |
|
| HMMPanther |
PTHR31048 |
FAMILY |
6.9e-51 |
1-131 |
| Seg |
seg |
seg |
NA |
122-130 |
- Wolf-PSORT
Lj2g3v2087750.1 chlo 3, nucl 3, cyto 3, cyto_nucl 3, plas 2.5, E.R._plas 2.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2087750.1 |
|