Miyakogusa Predicted Gene
- Lj2g3v2084420.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NCV9_SOYBN |
173 |
88.4 |
92.6 |
(tr|I1NCV9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G01910.1 |
124 |
61.5 |
82.3 |
| Symbols: ATMAP65-6, MAP65-6 | Microtubule associated protein (MAP65/ASE1) family protein | chr2:417191-420182 FORWARD LENGTH=608 |
| Medicago |
Medtr1g038840.1 |
170 |
82.1 |
94.7 |
| microtubule associated protein, MAP65/ASE1 family protein | HC | chr1:14340657-14335195 | 20130731 |
| Soybean |
Glyma20g00290.1 |
173 |
88.4 |
92.6 |
|
| LJGI |
gnl|LJGI|TC65134 |
559 |
100.0 |
100.0 |
similar to UniRef100_A7P409 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2084420.1 |
length: 96 aa. |
| IPR007145 |
Microtubule-associated protein, MAP65/Ase1/PRC1 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0000226 |
microtubule cytoskeleton organization |
|
|
| Biological Process |
GO:0000910 |
cytokinesis |
|
|
| Molecular Function |
GO:0008017 |
microtubule binding |
|
|
| HMMPanther |
PTHR19321 |
PROTEIN |
3.1e-15 |
1-88 |
| no_ID |
|
| HMMPanther |
PTHR19321:SF0 |
SUBFAMILY |
3.1e-15 |
1-88 |
- Wolf-PSORT
Lj2g3v2084420.1 extr 7, cyto 3, chlo 1, nucl 1, mito 1, cysk 1, chlo_mito 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2084420.1 |
Not targeted |
-32.841 |
-0.729 |
-3.673 |
36.74% |
-28.438
|