Miyakogusa Predicted Gene
- Lj2g3v2061270.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7K595_SOYBN |
830 |
65.1 |
75.2 |
(tr|K7K595) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G41580.1 |
428 |
46.5 |
63.8 |
| Symbols: | RING/U-box superfamily protein | chr5:16626563-16630659 REVERSE LENGTH=760 |
| Medicago |
Medtr5g009920.1 |
775 |
61.0 |
71.4 |
| transcription factor-like protein | HC | chr5:2534030-2544588 | 20130731 |
| Soybean |
Glyma11g02330.1 |
606 |
51.1 |
62.1 |
|
| LJGI |
gnl|LJGI|TC58253 |
1536 |
100.0 |
100.0 |
similar to UniRef100_O04238 Cluster: Transcription factor; n=1; Vicia faba var. minor|Rep: Transcription factor - Vicia faba var. minor, partial (25%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2061270.1 |
length: 666 aa. |
| IPR004181 |
Zinc finger, MIZ-type |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| HMMPfam |
PF02891 |
zf-MIZ |
1e-20 |
311-360 |
| ProfileScan |
PS51044 |
ZF_SP_RING |
40.177 |
300-377 |
| no_ID |
|
| HMMPanther |
PTHR10782 |
ZINC |
5.8e-42 |
299-397 |
| HMMPanther |
PTHR10782:SF4 |
SUBFAMILY |
5.8e-42 |
299-397 |
- Wolf-PSORT
Lj2g3v2061270.1 chlo 6, nucl 4, cyto 1, mito 1, extr 1, cysk 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2061270.1 |
|