Miyakogusa Predicted Gene

Lj2g3v2003070.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JA22_SOYBN 542 92.0 93.8 (tr|I1JA22) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G62990.1 476 80.5 87.0 | Symbols: KNAT7, IXR11 | KNOTTED-like homeobox of Arabidopsis thaliana 7 | chr1:23337468-23340348 FORWARD LENGTH=291
Medicago Medtr5g011070.1 492 86.1 90.1 | class II knotted-like homeobox protein | HC | chr5:3129401-3124980 | 20130731
Soybean Glyma01g42410.1 542 92.0 93.8  
LJGI gnl|LJGI|TC78918 1699 99.5 99.5 similar to UniRef100_A7QKD4 Cluster: Chromosome chr2 scaffold_112, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_112, whole genome shotgun sequence - Vitis vinifera (Grape), partial (91%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2003070.1 length: 290 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00389 Homeodomain 1.3e-10 214-279
ProfileScan PS50071 HOMEOBOX_2 11.677 212-275
IPR005539 ELK
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03789 ELK 6.9e-06 192-213
ProfileScan PS51213 ELK 9.132 192-212
IPR005540 KNOX1
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03790 KNOX1 3.8e-18 27-69
IPR005541 KNOX2
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03791 KNOX2 1.5e-17 82-136
IPR008422 Homeobox KN domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF05920 Homeobox_KN 2.7e-16 232-271
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 6.5e-24 219-277
superfamily SSF46689 Homeodomain-like 6.7e-15 198-274
no_ID  
HMMPanther PTHR11850 HOMEOBOX 1e-64 28-273
Wolf-PSORT
Lj2g3v2003070.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2003070.1