Miyakogusa Predicted Gene

Lj2g3v2002880.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7K538_SOYBN 552 67.6 73.2 (tr|K7K538) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT4G22860.1 321 45.1 58.5 | Symbols: | Cell cycle regulated microtubule associated protein | chr4:11997735-12001281 FORWARD LENGTH=509

Medicago Medtr5g011390.1 481 61.3 71.5 | cell cycle regulated microtubule-associated protein | LC | chr5:3256522-3248559 | 20130731

Soybean Glyma11g03060.1 472 57.9 64.7

LJGI gnl|LJGI|FS334889 1084 98.4 98.4 similar to UniRef100_A7QK99 Cluster: Chromosome chr2 scaffold_112, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_112, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v2002880.1 length: 439 aa.

IPR027330 TPX2, central domain

method AccNumber shortName E-value location

HMMPfam PF12214 TPX2_importin 5.7e-44 223-390

no_ID

Seg seg seg NA 1-19
88-101

Wolf-PSORT

Lj2g3v2002880.1 nucl 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v2002880.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7K538_SOYBN	552	67.6	73.2	(tr\|K7K538) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT4G22860.1	321	45.1	58.5	\| Symbols: \| Cell cycle regulated microtubule associated protein \| chr4:11997735-12001281 FORWARD LENGTH=509
Medicago	Medtr5g011390.1	481	61.3	71.5	\| cell cycle regulated microtubule-associated protein \| LC \| chr5:3256522-3248559 \| 20130731
Soybean	Glyma11g03060.1	472	57.9	64.7
LJGI	gnl\|LJGI\|FS334889	1084	98.4	98.4	similar to UniRef100_A7QK99 Cluster: Chromosome chr2 scaffold_112, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr2 scaffold_112, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)

IPR027330	TPX2, central domain
Lj2g3v2002880.1				length: 439 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF12214	TPX2_importin	5.7e-44	223-390
no_ID
Seg	seg	seg	NA	1-19 88-101