Miyakogusa Predicted Gene

Lj2g3v2002310.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JS84_SOYBN 946 85.7 88.1 (tr|I1JS84) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G31820.1 752 67.3 79.5 | Symbols: | Ankyrin repeat family protein | chr2:13530350-13532562 FORWARD LENGTH=662
Medicago Medtr7g117620.1 927 84.3 87.4 | ankyrin repeat protein | HC | chr7:48789283-48796112 | 20130731
Soybean Glyma03g42530.1 946 85.7 88.1  
LJGI gnl|LJGI|TC61228 1661 99.5 99.5 similar to UniRef100_A7QAZ9 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2002310.1 length: 546 aa.
IPR002110 Ankyrin repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00248 ankyrin 6 42-71
81-110
116-145
150-179
184-213
218-248
252-282
286-316
ProfileScan PS50088 ANK_REPEAT 8.950 42-74
184-216
150-182
252-285
218-251
286-318
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 5.4e-61 38-322
HMMPfam PF12796 Ank_2 7e-15 38-104
122-209
223-312
ProfileScan PS50297 ANK_REP_REGION 57.830 42-318
superfamily SSF48403 Ankyrin 4.1e-57 46-313
IPR026961 PGG domain
HMMPfam PF13962 PGG 7.2e-25 366-478
no_ID  
HMMPanther PTHR24186 FAMILY 4e-179 40-546
HMMPanther PTHR24186:SF1 SUBFAMILY 4e-179 40-546
Seg seg seg NA 374-392
409-423
434-443
Wolf-PSORT
Lj2g3v2002310.1	plas 9, vacu 3, E.R. 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2002310.1