Miyakogusa Predicted Gene
- Lj2g3v2001370.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JXD8_MEDTR |
230 |
87.3 |
92.1 |
(tr|G7JXD8) DNA mismatch repair protein mutS OS=Medicago truncatula GN=MTR_5g012900 PE=3 SV=1 |
| TAIR_pep |
AT4G17380.1 |
182 |
64.3 |
84.9 |
| Symbols: MSH4, ATMSH4 | MUTS-like protein 4 | chr4:9708742-9714068 FORWARD LENGTH=792 |
| Medicago |
Medtr5g097770.1 |
85.5 |
50.0 |
67.0 |
| hypothetical protein | HC | chr5:42824927-42820035 | 20130731 |
| Soybean |
Glyma11g03750.1 |
222 |
82.7 |
92.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2001370.1 |
length: 126 aa. |
| IPR000432 |
DNA mismatch repair protein MutS, C-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Biological Process |
GO:0006298 |
mismatch repair |
|
|
| Molecular Function |
GO:0030983 |
mismatched DNA binding |
|
|
| HMMPfam |
PF00488 |
MutS_V |
2.6e-08 |
3-71 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
1.9e-07 |
5-70 |
| HMMPanther |
PTHR11361 |
DNA |
8.4e-55 |
1-119 |
| HMMPanther |
PTHR11361:SF36 |
MUTS |
8.4e-55 |
1-119 |
- Wolf-PSORT
Lj2g3v2001370.1 cyto 7.5, cyto_E.R. 4.5, nucl 3, plas 1, extr 1, cysk 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2001370.1 |
|