Miyakogusa Predicted Gene
- Lj2g3v1989220.4
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6TEF8_SOYBN |
341 |
77.0 |
87.1 |
(tr|C6TEF8) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT5G47310.1 |
280 |
62.8 |
78.0 |
| Symbols: | PPPDE putative thiol peptidase family protein | chr5:19201325-19202674 FORWARD LENGTH=245 |
| Medicago |
Medtr5g013040.1 |
313 |
75.6 |
87.6 |
| PPPDE thiol peptidase family protein, putative | HC | chr5:4094596-4091411 | 20130731 |
| Soybean |
Glyma11g03880.1 |
341 |
77.0 |
87.1 |
|
| LJGI |
gnl|LJGI|TC75519 |
553 |
99.3 |
99.3 |
similar to UniRef100_A7QY34 Cluster: Chromosome undetermined scaffold_237, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_237, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1989220.4 |
length: 215 aa. |
| IPR008580 |
Domain of unknown function DUF862, eukaryotic |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05903 |
DUF862 |
1.2e-46 |
23-157 |
| no_ID |
|
| HMMPanther |
PTHR12378 |
UNCHARACTERIZED |
3.4e-74 |
6-210 |
- Wolf-PSORT
Lj2g3v1989220.4 nucl 8, chlo 2, cyto 2, mito 1, extr 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1989220.4 |
|