Miyakogusa Predicted Gene

Lj2g3v1989100.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7K4X7_SOYBN 387 67.1 75.9 (tr|K7K4X7) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT4G17540.1 186 37.5 54.4 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:9775982-9777765 FORWARD LENGTH=294

Medicago Medtr5g013280.3 386 65.1 74.6 | transmembrane protein, putative | HC | chr5:4181676-4185736 | 20130731

Soybean Glyma01g41420.1 332 60.0 67.8

LJGI gnl|LJGI|TC82641 1810 99.8 99.8 similar to UniRef100_A7R0F0 Cluster: Chromosome undetermined scaffold_306, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_306, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v1989100.2 length: 307 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 254-275

Seg seg seg NA 30-42
89-103

Wolf-PSORT

Lj2g3v1989100.2 cyto 8, nucl 5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v1989100.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7K4X7_SOYBN	387	67.1	75.9	(tr\|K7K4X7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT4G17540.1	186	37.5	54.4	\| Symbols: \| unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr4:9775982-9777765 FORWARD LENGTH=294
Medicago	Medtr5g013280.3	386	65.1	74.6	\| transmembrane protein, putative \| HC \| chr5:4181676-4185736 \| 20130731
Soybean	Glyma01g41420.1	332	60.0	67.8
LJGI	gnl\|LJGI\|TC82641	1810	99.8	99.8	similar to UniRef100_A7R0F0 Cluster: Chromosome undetermined scaffold_306, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_306, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)

no_ID
Lj2g3v1989100.2				length: 307 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	254-275
Seg	seg	seg	NA	30-42 89-103