Miyakogusa Predicted Gene

Lj2g3v1989070.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SMW1_LOTJA 400 90.5 90.5 (tr|I3SMW1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G47180.2 266 65.8 80.3 | Symbols: | Plant VAMP (vesicle-associated membrane protein) family protein | chr5:19161384-19163265 REVERSE LENGTH=220
Medicago Medtr5g013320.1 346 76.1 86.0 | VAMP-associated protein | HC | chr5:4204900-4209367 | 20130731
Soybean Glyma11g04030.1 343 77.5 84.2  
LJGI gnl|LJGI|TC68277 1138 100.0 100.0 similar to UniRef100_A7R0E4 Cluster: Chromosome undetermined scaffold_306, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_306, whole genome shotgun sequence - Vitis vinifera (Grape), partial (65%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1989070.1 length: 222 aa.
IPR000535 Major sperm protein
method AccNumber shortName E-value location
Molecular Function GO:0005198 structural molecule activity    
HMMPfam PF00635 Motile_Sperm 1.2e-28 7-108
ProfileScan PS50202 MSP 28.526 1-126
IPR008962 PapD-like
Gene3D G3DSA:2.60.40.360 no description 2.6e-35 5-123
superfamily SSF49354 PapD-like 2.1e-42 1-127
IPR016763 Vesicle-associated membrane protein
HMMPIR PIRSF019693 VAMP-associated 2.1e-70 1-213
no_ID  
Coil coil coiled-coil NA 155-183
HMMPanther PTHR10809 VESICLE-ASSOCIATED 3.2e-68 1-217
HMMPanther PTHR10809:SF6 VESICLE-ASSOCIATED 3.2e-68 1-217
Seg seg seg NA 199-216
Wolf-PSORT
Lj2g3v1989070.1	golg 5, plas 2.5, nucl 2, cyto 2, cyto_nucl 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1989070.1