Miyakogusa Predicted Gene

Lj2g3v1989050.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J9R1_SOYBN 788 73.1 79.3 (tr|I1J9R1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G17570.3 431 50.2 63.7 | Symbols: GATA26 | GATA transcription factor 26 | chr4:9784329-9786974 REVERSE LENGTH=514
Medicago Medtr5g013370.1 693 69.0 75.3 | GATA transcription factor-like protein | HC | chr5:4229715-4234914 | 20130731
Soybean Glyma11g04060.1 783 73.5 79.5  
LJGI gnl|LJGI|TC80041 769 100.0 100.0 weakly similar to UniRef100_A7R377 Cluster: Chromosome undetermined scaffold_489, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_489, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1989050.1 length: 540 aa.
IPR000679 Zinc finger, GATA-type
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00320 GATA 9.6e-14 7-41
HMMSmart SM00401 zinc 8.5e-10 1-53
PatternScan PS00344 GATA_ZN_FINGER_1 NA 7-32
ProfileScan PS50114 GATA_ZN_FINGER_2 11.200 7-40
IPR013088 Zinc finger, NHR/GATA-type
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:3.30.50.10 no description 2.1e-11 7-41
no_ID  
HMMPfam PF13658 UCH37_bd 4.7e-13 302-375
Seg seg seg NA 110-124
408-422
521-535
superfamily SSF57716 Glucocorticoid 3.5e-13 1-46
Wolf-PSORT
Lj2g3v1989050.1	nucl 9, chlo 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1989050.1