Miyakogusa Predicted Gene

Lj2g3v1988980.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LMX6_SOYBN 1517 76.4 80.8 (tr|K7LMX6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G41150.1 1174 64.7 76.0 | Symbols: UVH1, ATRAD1, RAD1 | Restriction endonuclease, type II-like superfamily protein | chr5:16473044-16476919 REVERSE LENGTH=956
Medicago Medtr5g013480.1 1496 75.4 80.2 | DNA repair endonuclease UVH1-like protein | HC | chr5:4284600-4278305 | 20130731
Soybean Glyma11g04110.1 915 76.0 80.9  
LJGI gnl|LJGI|TC60168 1172 99.8 99.8 similar to UniRef100_A7QZM4 Cluster: Chromosome undetermined scaffold_279, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_279, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1988980.1 length: 956 aa.
IPR006166 ERCC4 domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0004518 nuclease activity    
Biological Process GO:0006259 DNA metabolic process    
HMMSmart SM00891 ERCC4 2.1e-24 725-805
IPR010994 RuvA domain 2-like
superfamily SSF47781 RuvA 3.8e-14 881-952
IPR011335 Restriction endonuclease type II-like
superfamily SSF52980 Restriction 5.3e-38 721-863
IPR020819 DNA repair nuclease, XPF-type/Helicase
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0004518 nuclease activity    
Biological Process GO:0006259 DNA metabolic process    
Gene3D G3DSA:3.40.50.10130 no description 6e-49 722-871
no_ID  
Coil coil coiled-coil NA 392-417
HMMPanther PTHR10150 DNA 0 1-956
Seg seg seg NA 16-61
340-360
377-385
391-403
470-478
920-934
Wolf-PSORT
Lj2g3v1988980.1	nucl 4, cyto 4, cyto_nucl 4, plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1988980.1