Miyakogusa Predicted Gene

Lj2g3v1988790.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J9P3_SOYBN 877 79.2 85.4 (tr|I1J9P3) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G17090.1 767 69.5 79.2 | Symbols: CT-BMY, BAM3, BMY8 | chloroplast beta-amylase | chr4:9605266-9607250 REVERSE LENGTH=548
Medicago Medtr4g099110.1 845 75.6 83.9 | beta-amylase | HC | chr4:41042225-41044834 | 20130731
Soybean Glyma01g41190.1 877 79.2 85.4  
LJGI gnl|LJGI|TC58955 1917 99.5 99.5 similar to UniRef100_Q5F305 Cluster: Beta-amylase; n=1; Glycine max|Rep: Beta-amylase - Glycine max (Soybean), partial (58%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1988790.1 length: 535 aa.
IPR001554 Glycoside hydrolase, family 14
method AccNumber shortName E-value location
Biological Process GO:0000272 polysaccharide catabolic process    
Molecular Function GO:0016161 beta-amylase activity    
FPrintScan PR00750 BETAAMYLASE 9.3e-71 108-122
129-147
151-172
243-265
318-337
354-370
371-382
389-412
426-448
HMMPfam PF01373 Glyco_hydro_14 3.4e-154 77-492
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 2.4e-210 71-504
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 7.6e-180 68-503
IPR018238 Glycoside hydrolase, family 14, conserved site
Biological Process GO:0000272 polysaccharide catabolic process    
Molecular Function GO:0016161 beta-amylase activity    
PatternScan PS00506 BETA_AMYLASE_1 NA 155-163
no_ID  
HMMPanther PTHR31352 FAMILY 1.1e-292 41-535
HMMPanther PTHR31352:SF0 SUBFAMILY 1.1e-292 41-535
Seg seg seg NA 520-528
Wolf-PSORT
Lj2g3v1988790.1	chlo 8, nucl 2, E.R. 2, cyto 1, vacu 1, cysk_nucl 1, nucl_plas 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1988790.1