Miyakogusa Predicted Gene

Lj2g3v1988750.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LGW5_SOYBN 270 51.6 56.7 (tr|I1LGW5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G32740.1 171 36.2 47.2 | Symbols: | SBP (S-ribonuclease binding protein) family protein | chr1:11844883-11846082 FORWARD LENGTH=312
Medicago Medtr5g013690.1 223 44.1 50.4 | SBP (S-ribonuclease-binding protein) family protein | HC | chr5:4404637-4406926 | 20130731
Soybean Glyma11g04240.1 270 51.6 56.7  
LJGI gnl|LJGI|BP077155 603 100.0 100.0 similar to UniRef100_A7PCG7 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1988750.1 length: 314 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 9.450 267-301
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 0.00021 262-302
IPR017066 S-ribonuclease binding protein, SBP1, pollen
HMMPIR PIRSF036836 Ribonuclease-binding 3e-92 1-314
no_ID  
Coil coil coiled-coil NA 131-167
176-239
HMMPanther PTHR14493 UNCHARACTERIZED 5.5e-56 1-311
HMMPanther PTHR14493:SF21 PROTEIN 5.5e-56 1-311
HMMPfam PF13920 zf-C3HC4_3 5e-09 265-302
Seg seg seg NA 106-137
147-160
184-199
215-226
Wolf-PSORT
Lj2g3v1988750.1	nucl 12, cyto 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1988750.1