Miyakogusa Predicted Gene

Lj2g3v1988700.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LGW7_SOYBN 7377 82.7 88.9 (tr|I1LGW7) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G17140.3 3462 59.8 74.0 | Symbols: | pleckstrin homology (PH) domain-containing protein | chr4:9613617-9636618 REVERSE LENGTH=4219
Medicago Medtr5g013780.1 7325 82.2 88.6 | vacuolar protein sorting protein | HC | chr5:4444545-4498541 | 20130731
Soybean Glyma11g04260.1 4357 82.5 88.7  
LJGI gnl|LJGI|TC82161 1961 100.0 100.0 similar to UniRef100_A7PCH1 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1988700.2 length: 4350 aa.
IPR001849 Pleckstrin homology domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0005543 phospholipid binding    
HMMPfam PF00169 PH 2.4e-07 799-907
HMMSmart SM00233 Pleckstrin 2.4e-12 797-910
ProfileScan PS50003 PH_DOMAIN 10.623 796-908
IPR006614 Peroxin/Ferlin domain
Cellular Component GO:0016021 integral to membrane    
HMMSmart SM00693 Dysferlin 0.0079 2875-2933
IPR009291 Vacuolar protein sorting-associated protein 62
HMMPfam PF06101 DUF946 1.5e-09 1994-2136
2223-2420
IPR009543 Vacuolar protein sorting-associated protein 13 domain
HMMPfam PF06650 DUF1162 8.2e-14 3332-3497
IPR011993 Pleckstrin homology-like domain
Gene3D G3DSA:2.30.29.30 no description 1.2e-18 794-909
IPR026847 Vacuolar protein sorting-associated protein 13
HMMPanther PTHR16166 VACUOLAR 0 2-4107
IPR026854 Vacuolar protein sorting-associated protein 13A N-terminal domain
HMMPfam PF12624 Chorein_N 1.5e-37 2-115
no_ID  
Coil coil coiled-coil NA 111-132
609-630
HMMPanther PTHR16166:SF62 PH 0 2-4107
Seg seg seg NA 391-405
446-457
1190-1198
1697-1712
1891-1900
2113-2131
3050-3066
3257-3270
3551-3555
4133-4146
superfamily SSF50729 PH 7.9e-15 791-916
Wolf-PSORT
Lj2g3v1988700.2	nucl 6, E.R. 3, cysk_nucl 3, chlo 2, plas 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1988700.2