Miyakogusa Predicted Gene
- Lj2g3v1988570.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JYP6_MEDTR |
238 |
76.3 |
81.6 |
(tr|G7JYP6) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_5g013800 PE=4 SV=1 |
| TAIR_pep |
AT5G47020.1 |
163 |
53.6 |
65.6 |
| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19082005-19089800 FORWARD LENGTH=1421 |
| Medicago |
Medtr5g013800.1 |
238 |
76.3 |
81.6 |
| transmembrane protein, putative | HC | chr5:4526714-4513931 | 20130731 |
| Soybean |
Glyma01g41140.1 |
246 |
75.7 |
80.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1988570.1 |
length: 151 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR31513 |
FAMILY |
2.1e-55 |
1-148 |
| Seg |
seg |
seg |
NA |
19-41 |
- Wolf-PSORT
Lj2g3v1988570.1 chlo 5.5, chlo_mito 4, vacu 2, E.R. 2, E.R._vacu 2, mito 1.5, cyto_E.R. 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1988570.1 |
|