Miyakogusa Predicted Gene

Lj2g3v1984990.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SG06_LOTJA 855 95.2 95.2 (tr|I3SG06) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G46630.1 827 91.6 93.4 | Symbols: | Clathrin adaptor complexes medium subunit family protein | chr5:18920580-18923252 FORWARD LENGTH=438
Medicago Medtr5g014330.1 845 93.6 95.2 | clathrin-adaptor medium chain AP-2 | HC | chr5:4799531-4790979 | 20130731
Soybean Glyma11g04600.1 844 93.4 95.0  
LJGI gnl|LJGI|TC65601 2609 99.9 99.9 homologue to UniRef100_A7PCC1 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1984990.1 length: 438 aa.
IPR001392 Clathrin adaptor, mu subunit
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
FPrintScan PR00314 CLATHRINADPT 9.1e-63 15-35
102-129
168-196
248-275
317-332
357-368
HMMPIR PIRSF005992 Adaptor 3.3e-175 4-438
IPR008968 Clathrin adaptor, mu subunit, C-terminal
Molecular Function GO:0005515 protein binding    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
HMMPfam PF00928 Adap_comp_sub 8e-91 167-438
ProfileScan PS51072 MHD 98.579 174-438
superfamily SSF49447 Second 8.9e-95 166-438
IPR011012 Longin-like domain
Biological Process GO:0006810 transport    
superfamily SSF64356 SNARE-like 3.4e-34 4-145
IPR015629 Clathrin coat associated protein AP-50
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
Cellular Component GO:0030132 clathrin coat of coated pit    
HMMPanther PTHR11998:SF12 CLATHRIN 1.5e-243 1-438
IPR018240 Clathrin adaptor, mu subunit, conserved site
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
PatternScan PS00990 CLAT_ADAPTOR_M_1 NA 166-186
no_ID  
Gene3D G3DSA:2.60.40.1170 no description 1.9e-59 167-333
Gene3D G3DSA:3.30.450.60 no description 1.9e-44 5-142
HMMPanther PTHR11998 CLATHRIN 1.5e-243 1-438
Seg seg seg NA 63-81
Wolf-PSORT
Lj2g3v1984990.1	cyto 7.5, cyto_nucl 4.5, chlo 3, plas 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1984990.1