Miyakogusa Predicted Gene
- Lj2g3v1984730.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LH18_SOYBN |
551 |
88.5 |
94.6 |
(tr|I1LH18) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G17830.1 |
496 |
79.6 |
88.4 |
| Symbols: | Peptidase M20/M25/M40 family protein | chr4:9915916-9918049 FORWARD LENGTH=440 |
| Medicago |
Medtr5g014410.1 |
549 |
88.5 |
94.2 |
| M20 peptidase acetylornithine deacetylase | HC | chr5:4846984-4851709 | 20130731 |
| Soybean |
Glyma11g04650.1 |
551 |
88.5 |
94.6 |
|
| LJGI |
gnl|LJGI|TC71205 |
902 |
100.0 |
100.0 |
similar to UniRef100_A7PC95 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (66%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1984730.2 |
length: 289 aa. |
| IPR002933 |
Peptidase M20 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| Molecular Function |
GO:0016787 |
hydrolase activity |
|
|
| HMMPfam |
PF01546 |
Peptidase_M20 |
1.1e-07 |
2-284 |
| IPR011650 |
Peptidase M20, dimerisation domain |
| Gene3D |
G3DSA:3.30.70.360 |
no description |
1.8e-12 |
75-168 |
| HMMPfam |
PF07687 |
M20_dimer |
8.1e-07 |
63-169 |
| superfamily |
SSF55031 |
Bacterial |
2.7e-12 |
66-170 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
157-178 |
| Gene3D |
G3DSA:3.40.630.10 |
no description |
5e-12 |
227-287 |
| HMMPanther |
PTHR11014 |
PEPTIDASE |
6.7e-170 |
1-289 |
| HMMPanther |
PTHR11014:SF7 |
ACETYLORNITHINE |
6.7e-170 |
1-289 |
| superfamily |
SSF53187 |
Zn-dependent |
1.1e-09 |
1-287 |
- Wolf-PSORT
Lj2g3v1984730.2 cyto 4, chlo 3, plas 3, nucl 1, mito 1, extr 1, cysk 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1984730.2 |
|