Miyakogusa Predicted Gene

Lj2g3v1983980.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LN20_SOYBN 390 65.1 74.4 (tr|K7LN20) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G49690.1 249 46.6 57.0 | Symbols: RAX3, MYB84, ATMYB84 | myb domain protein 84 | chr3:18427941-18429100 FORWARD LENGTH=310
Medicago Medtr5g014990.1 368 62.7 69.7 | myb transcription factor | HC | chr5:5113035-5114677 | 20130731
Soybean Glyma05g23080.1 323 57.2 67.1  
LJGI gnl|LJGI|TC72932 1907 99.6 99.6 similar to UniRef100_A7NUE1 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (45%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1983980.1 length: 325 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 8.6e-10 14-62
69-111
HMMSmart SM00717 SANT 4.4e-11 13-64
67-115
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1e-22 15-69
70-117
superfamily SSF46689 Homeodomain-like 2.7e-25 14-114
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 14.759 63-117
9-62
no_ID  
Coil coil coiled-coil NA 122-143
HMMPanther PTHR10641 MYB-LIKE 5e-86 1-309
HMMPanther PTHR10641:SF30 MYB 5e-86 1-309
Seg seg seg NA 113-131
Wolf-PSORT
Lj2g3v1983980.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1983980.1