Miyakogusa Predicted Gene
- Lj2g3v1981870.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LN24_SOYBN |
568 |
68.9 |
80.0 |
(tr|K7LN24) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G10150.1 |
351 |
45.3 |
63.7 |
| Symbols: | Carbohydrate-binding protein | chr1:3326160-3327404 FORWARD LENGTH=414 |
| Medicago |
Medtr5g015150.1 |
552 |
66.7 |
76.6 |
| phloem A10-like protein | HC | chr5:5212723-5211099 | 20130731 |
| Soybean |
Glyma01g40350.1 |
393 |
69.9 |
77.0 |
|
| LJGI |
gnl|LJGI|TC74636 |
1350 |
99.6 |
99.6 |
similar to UniRef100_A7NUB5 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1981870.1 |
length: 423 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR21477 |
FAMILY |
1.9e-136 |
23-422 |
| HMMPanther |
PTHR21477:SF2 |
SUBFAMILY |
1.9e-136 |
23-422 |
| Seg |
seg |
seg |
NA |
189-206 |
- Wolf-PSORT
Lj2g3v1981870.1 nucl 8, E.R. 2, chlo 1, cyto 1, plas 1, cysk 1, E.R._vacu 1, cysk_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1981870.1 |
|