Miyakogusa Predicted Gene

Lj2g3v1968450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S107_LOTJA 317 100.0 100.0 (tr|I3S107) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G49870.1 297 93.5 97.4 | Symbols: ATARLA1C, ARLA1C | ADP-ribosylation factor-like A1C | chr3:18492674-18494021 REVERSE LENGTH=184
Medicago Medtr5g015370.1 314 99.4 99.4 | ADP-ribosylation factor-like protein A1D | HC | chr5:5322265-5316646 | 20130731
Soybean Glyma11g05080.1 312 98.7 98.7  
LJGI gnl|LJGI|TC59558 916 100.0 100.0 similar to UniRef100_Q10QD5 Cluster: Small GTP-binding protein domain containing protein, expressed; n=2; Oryza sativa|Rep: Small GTP-binding protein domain containing protein, expressed - Oryza sativa subsp. japonica (Rice), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1968450.1 length: 154 aa.
IPR003579 Small GTPase superfamily, Rab type
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 4e-05 20-154
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 5.8e-17 18-140
IPR006687 Small GTPase superfamily, SAR1-type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006886 intracellular protein transport    
HMMSmart SM00178 Sar1p-like 1.8e-06 4-152
IPR006689 Small GTPase superfamily, ARF/SAR type
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00328 SAR1GTPBP 6.3e-17 21-44
77-102
122-143
HMMPfam PF00025 Arf 1.5e-41 9-152
IPR024156 Small GTPase superfamily, ARF type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00177 ARF-like 3.5e-14 1-154
ProfileScan PS51417 ARF 16.310 13-154
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.3e-37 17-140
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.5e-44 11-151
HMMPanther PTHR11711 ADP 5.2e-109 1-154
HMMPanther PTHR11711:SF32 PUTATIVE 5.2e-109 1-154
Wolf-PSORT
Lj2g3v1968450.1	nucl 9, chlo 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1968450.1