Miyakogusa Predicted Gene

Lj2g3v1968200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MCS2_SOYBN 582 57.2 67.9 (tr|I1MCS2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G02650.1 414 47.9 66.5 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:568135-569865 FORWARD LENGTH=576
Medicago Medtr3g081310.1 626 58.8 70.4 | PPR containing plant protein | HC | chr3:36828718-36830894 | 20130731
Soybean Glyma15g02030.1 582 57.2 67.9  
LJGI gnl|LJGI|TC71507 1889 100.0 100.0 weakly similar to UniRef100_A7R293 Cluster: Chromosome undetermined scaffold_409, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_409, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1968200.1 length: 554 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13041 PPR_2 2.3e-09 396-440
465-510
HMMTigr TIGR00756 PPR: 4.3e-08 396-429
430-460
465-498
ProfileScan PS51375 PPR 8.758 217-251
252-286
287-321
358-392
393-427
463-497
428-462
498-533
no_ID  
HMMPanther PTHR24015 FAMILY 2.3e-54 106-531
HMMPanther PTHR24015:SF0 SUBFAMILY 2.3e-54 106-531
Seg seg seg NA 91-105
204-218
Wolf-PSORT
Lj2g3v1968200.1	mito 9, chlo 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1968200.1