Miyakogusa Predicted Gene
- Lj2g3v1965070.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
Q93YF9_MEDTR |
222 |
84.8 |
89.6 |
(tr|Q93YF9) Narf-like protein OS=Medicago truncatula PE=4 SV=1 |
| TAIR_pep |
AT4G16440.1 |
167 |
65.3 |
79.8 |
| Symbols: | ferredoxin hydrogenases | chr4:9269263-9271510 REVERSE LENGTH=474 |
| Medicago |
Medtr3g117360.2 |
221 |
84.0 |
89.6 |
| cytosolic Fe-S cluster assembly factor NARFL-like protein | HC | chr3:54912433-54920223 | 20130731 |
| Soybean |
Glyma07g39690.1 |
221 |
84.0 |
89.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1965070.2 |
length: 142 aa. |
| IPR004108 |
Iron hydrogenase, large subunit, C-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02906 |
Fe_hyd_lg_C |
4.3e-25 |
2-123 |
| IPR009016 |
Iron hydrogenase |
| superfamily |
SSF53920 |
Fe-only |
1.7e-27 |
1-119 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.1780 |
no description |
9.3e-24 |
2-106 |
| HMMPanther |
PTHR11615 |
NITRATE, |
1e-36 |
1-118 |
| HMMPanther |
PTHR11615:SF31 |
NARF-RELATED |
1e-36 |
1-118 |
- Wolf-PSORT
Lj2g3v1965070.2 cyto 8.5, cyto_E.R. 5.5, E.R. 1.5, mito 1, extr 1, cysk 1, golg 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1965070.2 |
|