Miyakogusa Predicted Gene

Lj2g3v1964060.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7LN42_SOYBN 210 56.2 65.2 (tr|K7LN42) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G67390.2 66.6 67.3 83.7 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | chr5:26887883-26888512 REVERSE LENGTH=176

Medicago Medtr4g095440.2 147 47.6 57.1 | hypothetical protein | HC | chr4:39784896-39782341 | 20130731

Soybean Glyma11g05310.1 188 52.2 60.9

LJGI gnl|LJGI|TC68330 75.8 86.6 86.6 similar to UniRef100_A7PLN3 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v1964060.1 length: 196 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 96-108
124-137

Wolf-PSORT

Lj2g3v1964060.1 nucl 7.5, cyto_nucl 7, cyto 5.5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v1964060.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7LN42_SOYBN	210	56.2	65.2	(tr\|K7LN42) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G67390.2	66.6	67.3	83.7	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). \| chr5:26887883-26888512 REVERSE LENGTH=176
Medicago	Medtr4g095440.2	147	47.6	57.1	\| hypothetical protein \| HC \| chr4:39784896-39782341 \| 20130731
Soybean	Glyma11g05310.1	188	52.2	60.9
LJGI	gnl\|LJGI\|TC68330	75.8	86.6	86.6	similar to UniRef100_A7PLN3 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)

no_ID
Lj2g3v1964060.1				length: 196 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	96-108 124-137