Miyakogusa Predicted Gene

Lj2g3v1931920.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K4N6_SOYBN 1694 84.0 89.4 (tr|K7K4N6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G37460.1 1224 62.3 76.3 | Symbols: SRFR1 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17608623-17615534 REVERSE LENGTH=1052
Medicago Medtr5g016190.1 1692 82.8 89.1 | suppressor of RPS4-RLD 1/TPR domain protein | HC | chr5:5750880-5763864 | 20130731
Soybean Glyma01g39830.2 1655 82.7 88.1  
LJGI gnl|LJGI|AV406706 553 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1931920.3 length: 984 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 0.00039 41-68
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.3e-16 37-103
285-396
397-479
480-550
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 51.704 37-104
280-551
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.00054 37-70
71-104
280-313
314-347
348-381
382-415
416-449
450-483
484-517
518-551
ProfileScan PS50005 TPR 8.850 280-313
314-347
348-381
382-415
416-449
450-483
484-517
518-551
no_ID  
HMMPanther PTHR23083 TETRATRICOPEPTIDE 0 10-825
HMMPanther PTHR23083:SF2 TETRATRICOPEPTIDE 0 10-825
HMMPfam PF13414 TPR_11 4.3e-11 285-345
349-412
419-480
484-547
Seg seg seg NA 111-118
689-707
superfamily SSF48452 TPR-like 1.8e-45 19-567
Wolf-PSORT
Lj2g3v1931920.3	nucl 5, chlo 3, cysk_nucl 3, mito 2, plas 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1931920.3