Miyakogusa Predicted Gene

Lj2g3v1915600.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S6W4_LOTJA 600 92.0 92.4 (tr|I3S6W4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G67270.1 408 61.8 71.4 | Symbols: ATEB1C, EB1C, ATEB1H1 | end binding protein 1C | chr5:26840248-26841984 REVERSE LENGTH=329
Medicago Medtr5g016520.1 469 73.9 82.3 | RP/EB family microtubule-associated protein | HC | chr5:5934758-5937281 | 20130731
Soybean Glyma01g39720.1 536 80.7 87.8  
LJGI gnl|LJGI|TC59092 1927 99.7 99.7 similar to UniRef100_A7PLH0 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (87%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1915600.1 length: 327 aa.
IPR001715 Calponin homology domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.10.418.10 no description 3.1e-55 7-132
HMMPfam PF00307 CH 1.1e-10 18-114
ProfileScan PS50021 CH 8.610 13-115
superfamily SSF47576 Calponin-homology 5e-42 1-131
IPR004953 EB1, C-terminal
Molecular Function GO:0008017 microtubule binding    
HMMPfam PF03271 EB1 4.7e-14 207-246
ProfileScan PS51230 EB1_C 14.739 183-253
superfamily SSF140612 EB1 1.7e-16 190-253
IPR027328 Microtubule-associated protein RP/EB
Molecular Function GO:0008017 microtubule binding    
HMMPanther PTHR10623 MICROTUBULE-ASSOCIATED 2.9e-106 1-296
no_ID  
Coil coil coiled-coil NA 191-212
HMMPanther PTHR10623:SF6 MICROTUBULE-ASSOCIATED 2.9e-106 1-296
Seg seg seg NA 170-193
Wolf-PSORT
Lj2g3v1915600.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1915600.1