Miyakogusa Predicted Gene

Lj2g3v1915590.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T7N3_LOTJA 369 98.4 98.4 (tr|I3T7N3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G62290.3 323 83.4 91.7 | Symbols: ARFA1E | ADP-ribosylation factor A1E | chr3:23052287-23053545 FORWARD LENGTH=181
Medicago Medtr5g016540.1 353 93.4 96.7 | ADP-ribosylation factor-like protein A1D | HC | chr5:5938869-5940386 | 20130731
Soybean Glyma01g39700.1 343 90.7 95.6  
LJGI gnl|LJGI|TC65842 1065 99.5 99.5 similar to UniRef100_A7PLG8 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1915590.2 length: 182 aa.
IPR003579 Small GTPase superfamily, Rab type
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 0.0032 18-180
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 8.2e-23 16-139
IPR006687 Small GTPase superfamily, SAR1-type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006886 intracellular protein transport    
HMMSmart SM00178 Sar1p-like 6.4e-27 1-177
IPR006689 Small GTPase superfamily, ARF/SAR type
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00328 SAR1GTPBP 2.8e-20 19-42
47-71
74-99
119-140
HMMPfam PF00025 Arf 1e-77 10-177
IPR024156 Small GTPase superfamily, ARF type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00177 ARF-like 2.2e-124 1-181
ProfileScan PS51417 ARF 24.489 11-177
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.2e-53 15-180
no_ID  
Gene3D G3DSA:3.40.50.300 no description 3.7e-71 17-179
HMMPanther PTHR11711 ADP 1.1e-113 1-177
Wolf-PSORT
Lj2g3v1915590.2	cyto_nucl 5, mito 4, nucl 3, cyto 3, chlo_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1915590.2