Miyakogusa Predicted Gene

Lj2g3v1903410.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1J999_SOYBN 369 74.8 78.9 (tr|I1J999) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G67230.1 270 64.4 76.1 | Symbols: IRX14-L, I14H | Nucleotide-diphospho-sugar transferases superfamily protein | chr5:26822506-26824181 FORWARD LENGTH=492

Medicago Medtr5g016600.1 350 71.3 75.2 | beta-1,4-xylosyltransferase, putative | HC | chr5:5971526-5967013 | 20130731

Soybean Glyma01g39610.1 369 74.8 78.9

LJGI gnl|LJGI|TC69287 698 99.7 99.7 homologue to UniRef100_Q4VZ79 Cluster: Glycosyltransferase; n=1; Glycine max|Rep: Glycosyltransferase - Glycine max (Soybean), partial (64%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v1903410.1 length: 243 aa.

IPR005027 Glycosyl transferase, family 43

method AccNumber shortName E-value location

Molecular Function GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity

Cellular Component GO:0016020 membrane

HMMPanther PTHR10896 GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 1.5e-54 1-180

HMMPfam PF03360 Glyco_transf_43 1.6e-33 1-157

no_ID

Gene3D G3DSA:3.90.550.10 no description 3.8e-29 1-171

HMMPanther PTHR10896:SF1 BETA-1,3-GLUCURONYLTRANSFERASE 1.5e-54 1-180

Seg seg seg NA 34-48
208-230

superfamily SSF53448 Nucleotide-diphospho-sugar 2.7e-34 1-176

Wolf-PSORT

Lj2g3v1903410.1 nucl 8, cyto 3, chlo 1, cysk 1, golg 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v1903410.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1J999_SOYBN	369	74.8	78.9	(tr\|I1J999) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G67230.1	270	64.4	76.1	\| Symbols: IRX14-L, I14H \| Nucleotide-diphospho-sugar transferases superfamily protein \| chr5:26822506-26824181 FORWARD LENGTH=492
Medicago	Medtr5g016600.1	350	71.3	75.2	\| beta-1,4-xylosyltransferase, putative \| HC \| chr5:5971526-5967013 \| 20130731
Soybean	Glyma01g39610.1	369	74.8	78.9
LJGI	gnl\|LJGI\|TC69287	698	99.7	99.7	homologue to UniRef100_Q4VZ79 Cluster: Glycosyltransferase; n=1; Glycine max\|Rep: Glycosyltransferase - Glycine max (Soybean), partial (64%)

IPR005027	Glycosyl transferase, family 43
Lj2g3v1903410.1				length: 243 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
Cellular Component	GO:0016020	membrane
HMMPanther	PTHR10896	GALACTOSYLGALACTOSYLXYLOSYLPROTEIN	1.5e-54	1-180
HMMPfam	PF03360	Glyco_transf_43	1.6e-33	1-157
no_ID
Gene3D	G3DSA:3.90.550.10	no description	3.8e-29	1-171
HMMPanther	PTHR10896:SF1	BETA-1,3-GLUCURONYLTRANSFERASE	1.5e-54	1-180
Seg	seg	seg	NA	34-48 208-230
superfamily	SSF53448	Nucleotide-diphospho-sugar	2.7e-34	1-176