Miyakogusa Predicted Gene

Lj2g3v1891000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J989_SOYBN 615 67.2 71.8 (tr|I1J989) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G36920.2 384 63.8 71.1 | Symbols: AP2 | Integrase-type DNA-binding superfamily protein | chr4:17400998-17403140 FORWARD LENGTH=432
Medicago Medtr5g016810.1 579 64.4 70.4 | AP2 domain transcription factor | HC | chr5:6063009-6066677 | 20130731
Soybean Glyma01g39520.1 615 67.2 71.8  
LJGI gnl|LJGI|TC65686 1318 99.9 99.9 similar to UniRef100_Q9AXI4 Cluster: APETAL2-like protein; n=1; Pisum sativum|Rep: APETAL2-like protein - Pisum sativum (Garden pea), partial (34%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1891000.1 length: 466 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 6e-06 226-237
264-284
Gene3D G3DSA:3.30.730.10 no description 3e-15 133-189
225-282
HMMPfam PF00847 AP2 1.1e-10 132-181
224-271
HMMSmart SM00380 DNA-binding 3.3e-30 133-195
225-288
ProfileScan PS51032 AP2_ERF 15.475 133-189
225-282
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 3.5e-18 224-285
132-192
no_ID  
HMMPanther PTHR32467 FAMILY 3.1e-136 5-307
HMMPanther PTHR32467:SF0 SUBFAMILY 3.1e-136 5-307
Seg seg seg NA 80-89
123-132
165-176
441-449
Wolf-PSORT
Lj2g3v1891000.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1891000.1