| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1J971_SOYBN | 608 | 80.8 | 87.5 | (tr|I1J971) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT4G36960.2 | 523 | 69.1 | 80.2 | | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:17427349-17429589 FORWARD LENGTH=379 |
| Medicago | Medtr5g017280.4 | 593 | 77.7 | 83.5 | | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr5:6293125-6298060 | 20130731 |
| Soybean | Glyma01g39330.1 | 608 | 80.8 | 87.5 | |
| LJGI | gnl|LJGI|TC70994 | 2151 | 99.3 | 99.3 | similar to UniRef100_Q0JG34 Cluster: Os01g0945800 protein; n=2; Oryza sativa Japonica Group|Rep: Os01g0945800 protein - Oryza sativa subsp. japonica (Rice), partial (77%) |
| Lj2g3v1876630.1 | length: 369 aa. | |||
| IPR000504 | RNA recognition motif domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMPfam | PF00076 | RRM_1 | 6.1e-15 | 6-63 94-154 235-291 |
| HMMSmart | SM00360 | RNA | 5.3e-17 | 5-76 93-164 234-305 |
| ProfileScan | PS50102 | RRM | 16.142 | 4-80 92-168 233-309 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 3.8e-19 | 3-85 89-173 224-317 |
| no_ID | ||||
| HMMPanther | PTHR24011 | FAMILY | 8.5e-150 | 1-365 |
| HMMPanther | PTHR24011:SF97 | SUBFAMILY | 8.5e-150 | 1-365 |
| Seg | seg | seg | NA | 177-194 |
| superfamily | SSF54928 | RNA-binding | 5.6e-21 | 91-292 2-85 |
Lj2g3v1876630.1 cyto 12, nucl 1, cysk 1, cysk_nucl 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v1876630.1 |