Miyakogusa Predicted Gene

Lj2g3v1863500.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T2K3_LOTJA 350 100.0 100.0 (tr|I3T2K3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G50360.1 251 76.3 86.4 | Symbols: ATCEN2, CEN1, CEN2 | centrin2 | chr3:18674421-18675502 FORWARD LENGTH=169
Medicago Medtr6g007613.1 301 87.7 92.4 | EF hand calcium-binding family protein | HC | chr6:1680394-1677597 | 20130731
Soybean Glyma15g06060.1 310 90.1 93.0  
LJGI gnl|LJGI|TC57371 1023 100.0 100.0 similar to UniRef100_Q9SQI5 Cluster: Centrin; n=1; Nicotiana tabacum|Rep: Centrin - Nicotiana tabacum (Common tobacco), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1863500.1 length: 171 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMSmart SM00054 EF-hand, 0.00043 30-58
66-94
103-131
139-167
ProfileScan PS50222 EF_HAND_2 11.919 26-61
62-97
99-134
135-170
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 2.5e-19 26-112
113-166
HMMPfam PF13499 EF_hand_5 5e-12 31-91
104-162
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 39-51
75-87
112-124
148-160
no_ID  
HMMPanther PTHR10891 EF-HAND 1.3e-92 3-169
HMMPanther PTHR10891:SF41 CENTRIN-RELATED 1.3e-92 3-169
superfamily SSF47473 EF-hand 4.2e-45 10-166
Wolf-PSORT
Lj2g3v1863500.1	nucl 5.5, cyto_nucl 4.5, mito 3, cyto 2.5, chlo_mito 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1863500.1