Miyakogusa Predicted Gene

Lj2g3v1831970.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1LHG9_SOYBN 442 67.7 72.3 (tr|I1LHG9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G19080.1 259 60.8 74.5 | Symbols: | SWIB complex BAF60b domain-containing protein | chr3:6596082-6598667 FORWARD LENGTH=462
Medicago Medtr5g018010.1 387 62.0 66.5 | upstream activation factor subunit UAF30, putative | HC | chr5:6695520-6691091 | 20130731
Soybean Glyma11g06240.1 442 67.7 72.3  
LJGI gnl|LJGI|TC67229 1306 99.6 99.6 similar to UniRef100_A7QYF2 Cluster: Chromosome undetermined scaffold_245, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome undetermined scaffold_245, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1831970.1 length: 339 aa.
IPR003121 SWIB/MDM2 domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF02201 SWIB 1e-26 136-210
260-335
superfamily SSF47592 SWIB/MDM2 5.1e-27 249-339
126-220
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1.1e-13 3-56
IPR014876 DEK, C-terminal
HMMPfam PF08766 DEK_C 8.1e-17 3-55
IPR019835 SWIB domain
HMMSmart SM00151 SWI 1.3e-31 135-214
258-339
no_ID  
Gene3D G3DSA:1.10.245.10 no description 2.8e-32 129-214
251-338
HMMPanther PTHR13844 BRG-1 5.5e-41 128-213
HMMPanther PTHR13844:SF0 SUBFAMILY 5.5e-41 128-213
Seg seg seg NA 58-74
88-123
217-231
superfamily SSF109715 DEK 3.6e-13 3-59
Wolf-PSORT
Lj2g3v1831970.1	nucl 12, plas 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1831970.1