Miyakogusa Predicted Gene

Lj2g3v1828800.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J919_SOYBN 571 67.2 74.0 (tr|I1J919) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G37210.1 250 51.1 67.8 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17512376-17514421 FORWARD LENGTH=492
Medicago Medtr5g018600.1 545 65.1 73.9 | TPR domain protein | HC | chr5:6944048-6947851 | 20130731
Soybean Glyma01g38800.1 571 67.2 74.0  
LJGI gnl|LJGI|TC72125 1459 100.0 100.0 weakly similar to UniRef100_UPI000034F193 Cluster: tetratricopeptide repeat (TPR)-containing protein; n=1; Arabidopsis thaliana|Rep: tetratricopeptide repeat (TPR)-containing protein - Arabidopsis thaliana, partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1828800.1 length: 462 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.8e-11 225-312
IPR019544 Tetratricopeptide, SHNi-TPR domain
HMMPfam PF10516 SHNi-TPR 4.2e-09 239-275
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 1.6e+02 68-101
238-271
280-313
no_ID  
Coil coil coiled-coil NA 244-272
335-363
HMMPanther PTHR15081 NUCLEAR 8.7e-97 21-451
HMMPanther PTHR15081:SF1 HISTONE 8.7e-97 21-451
Seg seg seg NA 156-171
193-215
superfamily SSF48452 TPR-like 3.8e-11 68-309
Wolf-PSORT
Lj2g3v1828800.1	chlo 6, nucl 4, cyto 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1828800.1