Miyakogusa Predicted Gene

Lj2g3v1828670.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J914_SOYBN 580 83.6 92.4 (tr|I1J914) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G22410.1 291 44.5 64.3 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080 FORWARD LENGTH=681
Medicago Medtr5g018690.1 553 79.6 90.0 | PPR containing protein | HC | chr5:6968759-6971652 | 20130731
Soybean Glyma01g38730.1 577 83.5 92.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1828670.1 length: 330 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13041 PPR_2 3.5e-12 5-53
106-154
HMMTigr TIGR00756 PPR: 4.1e-05 8-41
109-143
144-179
ProfileScan PS51375 PPR 6.851 6-40
107-141
76-106
41-75
142-177
178-208
244-278
210-240
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.5e-06 207-263
no_ID  
HMMPanther PTHR24015 FAMILY 4.2e-142 2-323
HMMPanther PTHR24015:SF109SUBFAMILY NOT 4.2e-142 2-323
ProfileScan PS51257 PROKAR_LIPOPROTEIN 5.000 1-16
Wolf-PSORT
Lj2g3v1828670.1	chlo 6, cyto 2, extr 2, vacu 2, nucl 1, mito 1, E.R._vacu 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1828670.1