Miyakogusa Predicted Gene

Lj2g3v1828500.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K4I0_SOYBN 2383 76.2 84.5 (tr|K7K4I0) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G23740.2 1336 49.3 63.6 | Symbols: | nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding | chr2:10098213-10103229 FORWARD LENGTH=1382
Medicago Medtr5g018850.1 2350 75.2 83.4 | histone-lysine N-methyltransferase SUVR5-like protein | HC | chr5:7041525-7051964 | 20130731
Soybean Glyma11g06620.1 2230 77.1 85.6  
LJGI gnl|LJGI|AV415450 844 100.0 100.0 weakly similar to UniRef100_A7PV29 Cluster: Chromosome chr4 scaffold_32, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_32, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1828500.2 length: 1501 aa.
IPR001214 SET domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00856 SET 1.8e-22 1357-1477
HMMSmart SM00317 SET 8.9e-39 1346-1484
ProfileScan PS50280 SET 35.411 1345-1482
IPR003606 Pre-SET zinc-binding sub-group
Cellular Component GO:0005634 nucleus    
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0018024 histone-lysine N-methyltransferase activity    
Biological Process GO:0034968 histone lysine methylation    
HMMSmart SM00468 N-terminal 6.8e-05 1203-1330
IPR003616 Post-SET domain
ProfileScan PS50868 POST_SET 8.217 1485-1501
IPR007087 Zinc finger, C2H2
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 820-842
888-910
957-978
854-876
ProfileScan PS50157 ZINC_FINGER_C2H2_2 9.390 852-875
886-915
955-983
IPR007728 Pre-SET domain
Cellular Component GO:0005634 nucleus    
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0018024 histone-lysine N-methyltransferase activity    
Biological Process GO:0034968 histone lysine methylation    
HMMPfam PF05033 Pre-SET 2.2e-16 1206-1338
ProfileScan PS50867 PRE_SET 8.885 1267-1343
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 1.1 818-841
852-875
886-909
955-978
no_ID  
Gene3D G3DSA:2.170.270.10 no description 1.4e-74 1195-1500
HMMPanther PTHR22884 SET 2.2e-116 1129-1501
HMMPanther PTHR22884:SF1 SET 2.2e-116 1129-1501
HMMPfam PF12756 zf-C2H2_2 0.24 885-922
Seg seg seg NA 364-373
938-949
1254-1267
superfamily SSF57667 C2H2 0.0015 803-850
850-879
953-982
superfamily SSF82199 SET 4.5e-79 1187-1491
Wolf-PSORT
Lj2g3v1828500.2	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1828500.2