Miyakogusa Predicted Gene

Lj2g3v1828460.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LNB7_SOYBN 773 61.7 65.8 (tr|K7LNB7) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G36870.2 477 50.0 58.1 | Symbols: BLH2, SAW1 | BEL1-like homeodomain 2 | chr4:17369423-17373723 FORWARD LENGTH=739
Medicago Medtr5g018860.1 669 55.0 59.9 | BEL1-related homeotic protein | HC | chr5:7067906-7058877 | 20130731
Soybean Glyma11g06640.1 773 61.7 65.8  
LJGI gnl|LJGI|TC68249 2476 99.9 99.9 similar to UniRef100_A7PV26 Cluster: Chromosome chr4 scaffold_32, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_32, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1828460.1 length: 760 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00389 Homeodomain 1.2e-09 504-568
ProfileScan PS50071 HOMEOBOX_2 12.568 501-564
IPR006563 POX
HMMPfam PF07526 POX 1.6e-51 322-451
HMMSmart SM00574 domain 6.4e-76 317-452
IPR008422 Homeobox KN domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF05920 Homeobox_KN 8.9e-17 521-560
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 7.6e-28 507-570
superfamily SSF46689 Homeodomain-like 3.5e-17 502-579
no_ID  
Coil coil coiled-coil NA 570-591
HMMPanther PTHR11850 HOMEOBOX 3.3e-115 329-607
HMMPanther PTHR11850:SF15 HOMEOBOX 3.3e-115 329-607
Seg seg seg NA 159-173
241-249
277-283
346-359
361-367
573-585
593-621
650-665
Wolf-PSORT
Lj2g3v1828460.1	nucl 12, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1828460.1